Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015944110.1_cds_XP_016487049.1_77830
CDS Infomation

[gene=LOC107807221] [db_xref=GeneID:107807221] [protein=mechanosensitive ion channel protein 8-like isoform X2] [protein_id=XP_016487049.1] [location=join(44303..45678,46019..46142,46636..46929,47012..47055,47544..47829)] [gbkey=CDS]
Sequence

ATGGGTACATCCGAACCAGAGGACTCTATTGTGAAAATAAATAGCAGGGAATCCCCCAAA
ACCCCTAAAGAAACTGAATTGTCCGTTTCTTCAAAACCCCATTTCAACAAGAATGACAGC
AACAACAGTAATAAAGATTTAAACATAGTGAATGAGTCACCAGTTTCACAACATTCACCG
TTACACATGGCCCAGGAAGAAGCTTTACACTACAGTTCCAGCTCTTCTTTAAGGAAAAAA
TCTAGTCTTTTGGTGAGTAGGACCAAATCAAGGCTATTGGACCCACACCCACCTGAGCAA
GATCAGAGGTCTCAGAATGTTGCAATGAAATCTGGAGCTTTATTAAGAGATAGTGAAATT
GAAGAAGATGACGCTTTTTCAGATGAGGATTTGCCTGAGGAATACAAGAAACTGGAGTTC
AGTCCATTAACTGTACTTCAGCTGGTGAGTTTGGTTGTAATTATTGCAGCTCTAGTTTGC
GGTGTTATATTTAAAGTATTGAGGGAAAAAAAGGGCTTTGGGCTTGAATTGTGGAAATGG
GAAGCAGTGATTTTGGTGTTGATTTGTGGAAGATTGGTTTCTGGTTGGGGGATAAGGTTA
GTGGTTTTCTTGATTGAATGCAACTTTTTGTTGAGGAAAAGGGTTTTATATTTCGTTTAT
GGATTGAGAAATTCAGTGCAAAATTGCATTTGGTTGAGTCTGGTTTTGATTGCTTGGCAG
TCTATTTTTGACAAGAAGGTTGATAAAATGACTGGTGGGAAGGTTCTACCTTATGTGTCA
AGTATTTGGGTTTGTCTTTTGGTTGGTGCATACATTTGGTTGCTGAAAACACTTCTTGTG
AAGGTGCTGGCTATGTCATTTCATGTTAGTACATTCTTTGACCGTATTCAAGAATCGTTG
TTCAATCAGTATGTGATTGAGACGTTGTCTGGGCCGCCGTTGGTTGAGATTGATCAGCAG
GAGGAGGAAGAGAAGGTTATGGCTGAAGTGCAGAAACTTCAGAGTGCTGGGGCTACATTG
CCTGCTGATCTAAAGGCGAGTATATTTGCAAAAAGACCGATTGGAACACCACGCAAGAGT
CCTACGTCTGCTACTACGAGGAGTTCTGCATTTTCGAGGGTTATTTCTGAGAAGGTGAAA
GAAGAGGAGCGAGGAATCACTATAGATCATTTGCATAGACTGAATCAGAAGAACATTTCT
GCTTGGAATATGAAAAGGCTGATGAATATGGTTCGAAATGGTGTGCTGTCAACTTTGGAT
GAGAAGCTACCACAGTCGACTCATGAGGATGAATCGGCTGTGCAGATCACTAGTGAAAAA
AAGGCTAAAGCTGCAGCCAAGAAGATATTTAACAATGTGGCTAAGCCTGGCTCCAAGTTC
ATCTATCTGGAGGACTTGATGCGTTTTATGAGAGAAGATGAGGCTGTGAAAATAATGCGC
CTTATTGAAGGTGGAACTGAAACCAGCGGCATAAGTAAAGGGGCTTTAAAAAATTGGGTG
GTTAATGCATTTAGAGAACGAAGGGCTCTTGCTCTGTCTTTGAATGACACTAAGACTGCA
GTAAACAAACTTCATCAAATCTTGAACGTCCTTGTTGCAATTATCATATTGGTCATCTGG
CTCCTTATTCTCAGAGTTGCCACTACACATTTCTTGGTCTTTTTGAGTTCCCAGATGCTT
CTGGTAGTATTCATCTTCGGAAACTCAGCCAAGACGACATTCGAGGCAATCATCTTTTTA
TTTGTGATGCACCCATTTGATGTAGGCGATCGCGTTGAAGTTGATGGAGTTCAGTTGGTA
GTTGAAGAGATGAATATACTGACAACAGTTTTCCTAAGGTATATTGAGAACAGGAGCGAT
CATTGGCACCTAGCTCCAATGATTGTAATGAGGGACGTGGAGAACTTGAACGGAATAAAA
TGGTCAGTGTGGCCCTCACACACGATGAATCACCAAGATATGGGAGAGAGATGGGCGAGG
AGAGCTCTTCTGCTTGAAGAAATGGTAAAAATATTCAGGGAGCTGGATATCCAATACCGT
ATGCTACCTCTTGATGTCAACATTCGTACCCTGCCACCATTGTCTTCAAGCAGAGCTCCC
TCTAACTGGTCACTTTGTGCTTAA

Peptide Sequence

PEP ID

XP_016487049.1
PEP Infomation

PREDICTED: mechanosensitive ion channel protein 8-like isoform X2 [Nicotiana tabacum]
Sequence

MGTSEPEDSIVKINSRESPKTPKETELSVSSKPHFNKNDSNNSNKDLNIVNESPVSQHSP
LHMAQEEALHYSSSSSLRKKSSLLVSRTKSRLLDPHPPEQDQRSQNVAMKSGALLRDSEI
EEDDAFSDEDLPEEYKKLEFSPLTVLQLVSLVVIIAALVCGVIFKVLREKKGFGLELWKW
EAVILVLICGRLVSGWGIRLVVFLIECNFLLRKRVLYFVYGLRNSVQNCIWLSLVLIAWQ
SIFDKKVDKMTGGKVLPYVSSIWVCLLVGAYIWLLKTLLVKVLAMSFHVSTFFDRIQESL
FNQYVIETLSGPPLVEIDQQEEEEKVMAEVQKLQSAGATLPADLKASIFAKRPIGTPRKS
PTSATTRSSAFSRVISEKVKEEERGITIDHLHRLNQKNISAWNMKRLMNMVRNGVLSTLD
EKLPQSTHEDESAVQITSEKKAKAAAKKIFNNVAKPGSKFIYLEDLMRFMREDEAVKIMR
LIEGGTETSGISKGALKNWVVNAFRERRALALSLNDTKTAVNKLHQILNVLVAIIILVIW
LLILRVATTHFLVFLSSQMLLVVFIFGNSAKTTFEAIIFLFVMHPFDVGDRVEVDGVQLV
VEEMNILTTVFLRYIENRSDHWHLAPMIVMRDVENLNGIKWSVWPSHTMNHQDMGERWAR
RALLLEEMVKIFRELDIQYRMLPLDVNIRTLPPLSSSRAPSNWSLCA

Transcript Sequence

Gene sequence data has not been registered.